Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a6B1AVK5 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Gm15467-201ENSMUST00000120582 445 ntBASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a6B1AVK5 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.27■□□□□ 0.35
Col4a6B1AVK5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a6B1AVK5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a6B1AVK5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.27■□□□□ 0.35
Col4a6B1AVK5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.27■□□□□ 0.35
Col4a6B1AVK5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.27■□□□□ 0.35
Col4a6B1AVK5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Gm14140-201ENSMUST00000119999 995 ntBASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Gm11780-201ENSMUST00000136880 516 ntBASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Gm8969-201ENSMUST00000199694 526 ntBASIC17.26■□□□□ 0.35
Col4a6B1AVK5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a6B1AVK5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Gm10175-201ENSMUST00000086013 645 ntBASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a6B1AVK5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Gm14494-201ENSMUST00000118786 435 ntBASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Gm25911-201ENSMUST00000157621 56 ntBASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Gm6089-201ENSMUST00000197666 938 ntBASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a6B1AVK5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms