Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a5A6H584 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Gm7222-201ENSMUST00000117512 906 ntBASIC12.68□□□□□ -0.38
Col6a5A6H584 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col6a5A6H584 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.68□□□□□ -0.38
Col6a5A6H584 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.67□□□□□ -0.38
Col6a5A6H584 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col6a5A6H584 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.67□□□□□ -0.38
Col6a5A6H584 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.67□□□□□ -0.38
Col6a5A6H584 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col6a5A6H584 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.67□□□□□ -0.38
Col6a5A6H584 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Col6a5A6H584 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.67□□□□□ -0.38
Col6a5A6H584 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.67□□□□□ -0.38
Col6a5A6H584 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col6a5A6H584 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC12.67□□□□□ -0.38
Col6a5A6H584 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.67□□□□□ -0.38
Col6a5A6H584 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Col6a5A6H584 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col6a5A6H584 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.66□□□□□ -0.38
Col6a5A6H584 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col6a5A6H584 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.66□□□□□ -0.38
Col6a5A6H584 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.66□□□□□ -0.38
Col6a5A6H584 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.66□□□□□ -0.38
Col6a5A6H584 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.66□□□□□ -0.38
Col6a5A6H584 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.66□□□□□ -0.38
Col6a5A6H584 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.66□□□□□ -0.38
Col6a5A6H584 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col6a5A6H584 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col6a5A6H584 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.65□□□□□ -0.38
Col6a5A6H584 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col6a5A6H584 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Gm43545-201ENSMUST00000196765 2779 ntBASIC12.65□□□□□ -0.38
Col6a5A6H584 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Col6a5A6H584 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.65□□□□□ -0.38
Col6a5A6H584 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.65□□□□□ -0.38
Col6a5A6H584 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Col6a5A6H584 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col6a5A6H584 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.65□□□□□ -0.39
Col6a5A6H584 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col6a5A6H584 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms