Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn1aA2APX8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn1aA2APX8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn1aA2APX8 Gm9103-201ENSMUST00000119371 405 ntBASIC17.61■□□□□ 0.41
Scn1aA2APX8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn1aA2APX8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.61■□□□□ 0.41
Scn1aA2APX8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Scn1aA2APX8 Gm29707-201ENSMUST00000196325 491 ntBASIC17.61■□□□□ 0.41
Scn1aA2APX8 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.61■□□□□ 0.41
Scn1aA2APX8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn1aA2APX8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn1aA2APX8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn1aA2APX8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Scn1aA2APX8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn1aA2APX8 Gm27357-201ENSMUST00000183754 135 ntBASIC17.6■□□□□ 0.41
Scn1aA2APX8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn1aA2APX8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn1aA2APX8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn1aA2APX8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn1aA2APX8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn1aA2APX8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn1aA2APX8 Gm45328-201ENSMUST00000210942 917 ntBASIC17.6■□□□□ 0.41
Scn1aA2APX8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn1aA2APX8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn1aA2APX8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scn1aA2APX8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scn1aA2APX8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn1aA2APX8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.59■□□□□ 0.41
Scn1aA2APX8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Gm10052-201ENSMUST00000168019 960 ntBASIC17.59■□□□□ 0.41
Scn1aA2APX8 Gm7729-201ENSMUST00000050143 801 ntBASIC17.59■□□□□ 0.41
Scn1aA2APX8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn1aA2APX8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Scn1aA2APX8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn1aA2APX8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.58■□□□□ 0.41
Scn1aA2APX8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn1aA2APX8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn1aA2APX8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn1aA2APX8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn1aA2APX8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn1aA2APX8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.58■□□□□ 0.4
Scn1aA2APX8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.58■□□□□ 0.4
Scn1aA2APX8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn1aA2APX8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn1aA2APX8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn1aA2APX8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn1aA2APX8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn1aA2APX8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.56■□□□□ 0.4
Scn1aA2APX8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn1aA2APX8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms