Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Gm45612-201ENSMUST00000211320 160 ntBASIC8.86□□□□□ -0.99
Ubr4A2AN08 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Gm13365-201ENSMUST00000121188 973 ntBASIC8.85□□□□□ -0.99
Ubr4A2AN08 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Gm11745-201ENSMUST00000121669 448 ntBASIC8.85□□□□□ -0.99
Ubr4A2AN08 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC8.85□□□□□ -0.99
Ubr4A2AN08 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Phf7-203ENSMUST00000226565 1971 ntBASIC8.85□□□□□ -0.99
Ubr4A2AN08 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ubr4A2AN08 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Gm4899-201ENSMUST00000178708 719 ntBASIC8.84□□□□□ -0.99
Ubr4A2AN08 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC8.84□□□□□ -0.99
Ubr4A2AN08 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Gm27306-201ENSMUST00000183970 107 ntBASIC8.84□□□□□ -0.99
Ubr4A2AN08 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Gm38241-201ENSMUST00000192641 898 ntBASIC8.84□□□□□ -0.99
Ubr4A2AN08 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ubr4A2AN08 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Ubr4A2AN08 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC8.84□□□□□ -1
Ubr4A2AN08 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC8.84□□□□□ -1
Ubr4A2AN08 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Ubr4A2AN08 Gm16570-201ENSMUST00000161951 436 ntBASIC8.84□□□□□ -1
Ubr4A2AN08 Gm8825-201ENSMUST00000182565 998 ntBASIC8.84□□□□□ -1
Ubr4A2AN08 CT485787.1-201ENSMUST00000225617 968 ntBASIC8.84□□□□□ -1
Ubr4A2AN08 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Ubr4A2AN08 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Ubr4A2AN08 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC8.83□□□□□ -1
Ubr4A2AN08 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC8.83□□□□□ -1
Ubr4A2AN08 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ubr4A2AN08 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC8.83□□□□□ -1
Ubr4A2AN08 Gm7506-201ENSMUST00000207758 815 ntBASIC8.83□□□□□ -1
Ubr4A2AN08 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Ubr4A2AN08 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ubr4A2AN08 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ubr4A2AN08 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms