Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc112A0AUP1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Gm27000-201ENSMUST00000182943 842 ntBASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Gm9731-201ENSMUST00000209480 747 ntBASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc112A0AUP1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc112A0AUP1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc112A0AUP1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc112A0AUP1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Gm12085-201ENSMUST00000119263 940 ntBASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc112A0AUP1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms