Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rpl9-ps6A0A140T8T4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm11950-201ENSMUST00000121615 838 ntBASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm17808-201ENSMUST00000200859 894 ntBASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm21362-201ENSMUST00000194272 928 ntBASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm29707-201ENSMUST00000196325 491 ntBASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rpl9-ps6A0A140T8T4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm7367-201ENSMUST00000057611 492 ntBASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rpl9-ps6A0A140T8T4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms