Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm18958-201ENSMUST00000174258 762 ntBASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trbv13-2A0A140T8N6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm30025-201ENSMUST00000218555 728 ntBASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv13-2A0A140T8N6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv13-2A0A140T8N6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-2A0A140T8N6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.71□□□□□ -0.54
Trbv13-2A0A140T8N6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trbv13-2A0A140T8N6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-2A0A140T8N6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-2A0A140T8N6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trbv13-2A0A140T8N6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
Trbv13-2A0A140T8N6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-2A0A140T8N6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-2A0A140T8N6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv13-2A0A140T8N6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv13-2A0A140T8N6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms