Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm13559-201ENSMUST00000120476 863 ntBASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Mir6349-201ENSMUST00000184059 97 ntBASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm7367-201ENSMUST00000057611 492 ntBASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.67□□□□□ -0.22
Trav13n-4A0A0G2JG01 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm21362-201ENSMUST00000194272 928 ntBASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm3375-201ENSMUST00000203929 796 ntBASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav13n-4A0A0G2JG01 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13n-4A0A0G2JG01 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13n-4A0A0G2JG01 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms