Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm7638-201ENSMUST00000121348 967 ntBASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm37025-201ENSMUST00000195159 829 ntBASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm45058-201ENSMUST00000205810 766 ntBASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm7791-201ENSMUST00000219066 539 ntBASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm9731-201ENSMUST00000209480 747 ntBASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Idnk-204ENSMUST00000226010 1898 ntBASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13n-1A0A0G2JEU8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms