Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Gm21168-201ENSMUST00000199646 1096 ntBASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv8-28A0A0G2JE47 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC10.55□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms