Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.02□□□□□ -0.16
Trbv26A0A0B4J1P5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Trbv26A0A0B4J1P5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv26A0A0B4J1P5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.02□□□□□ -0.16
Trbv26A0A0B4J1P5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trbv26A0A0B4J1P5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv26A0A0B4J1P5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.02□□□□□ -0.16
Trbv26A0A0B4J1P5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Gm16061-201ENSMUST00000122167 857 ntBASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Gm13474-201ENSMUST00000122466 815 ntBASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Mir5130-201ENSMUST00000175160 84 ntBASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trbv26A0A0B4J1P5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv26A0A0B4J1P5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Gm43808-201ENSMUST00000202534 2065 ntBASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Trbv26A0A0B4J1P5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms