Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv20A0A0B4J1H5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv20A0A0B4J1H5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv20A0A0B4J1H5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv20A0A0B4J1H5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv20A0A0B4J1H5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv20A0A0B4J1H5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.08■□□□□ 0.01
Trbv20A0A0B4J1H5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.08■□□□□ 0.01
Trbv20A0A0B4J1H5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv20A0A0B4J1H5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv20A0A0B4J1H5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 Gm7291-201ENSMUST00000199147 382 ntBASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv20A0A0B4J1H5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trbv20A0A0B4J1H5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms