Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gm2559-201ENSMUST00000201323 363 ntBASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sirpb1aA0A0A6YYP6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms