Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Gm42545-201ENSMUST00000202755 922 ntBASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Gm12382-201ENSMUST00000122005 922 ntBASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ighv1-56A0A0A6YXG2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms