Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbc1A0A0A6YWV4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.46■□□□□ 0.06
Trbc1A0A0A6YWV4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbc1A0A0A6YWV4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbc1A0A0A6YWV4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbc1A0A0A6YWV4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm16061-201ENSMUST00000122167 857 ntBASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbc1A0A0A6YWV4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm13474-201ENSMUST00000122466 815 ntBASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm45058-201ENSMUST00000205810 766 ntBASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbc1A0A0A6YWV4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbc1A0A0A6YWV4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Mir5130-201ENSMUST00000175160 84 ntBASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm10231-201ENSMUST00000181584 441 ntBASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbc1A0A0A6YWV4 Gm10175-202ENSMUST00000208752 441 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms