Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6n-6A0A075B6B2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6n-6A0A075B6B2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6n-6A0A075B6B2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms