Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-7A0A075B6B0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm12382-201ENSMUST00000122005 922 ntBASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Trav6d-7A0A075B6B0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm43183-201ENSMUST00000200632 547 ntBASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm18025-201ENSMUST00000221733 862 ntBASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-7A0A075B6B0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm37055-201ENSMUST00000191866 133 ntBASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Dancr-204ENSMUST00000132389 2347 ntBASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-7A0A075B6B0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Gm42545-201ENSMUST00000202755 922 ntBASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-7A0A075B6B0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms