Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Gm37856-201ENSMUST00000191634 999 ntBASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-1A0A075B699 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 H2-K2-201ENSMUST00000174250 1049 ntBASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Gm9694-201ENSMUST00000193347 1189 ntBASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-1A0A075B699 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Gm12527-201ENSMUST00000117967 564 ntBASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Gm18666-201ENSMUST00000190039 958 ntBASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Gm43183-201ENSMUST00000200632 547 ntBASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav9d-1A0A075B699 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-1A0A075B699 Gm13216-201ENSMUST00000117145 591 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms