Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav18A0A075B656 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav18A0A075B656 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.79□□□□□ -0.2
Trav18A0A075B656 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav18A0A075B656 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav18A0A075B656 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav18A0A075B656 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.78□□□□□ -0.2
Trav18A0A075B656 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav18A0A075B656 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav18A0A075B656 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav18A0A075B656 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav18A0A075B656 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav18A0A075B656 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trav18A0A075B656 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Gm17661-201ENSMUST00000170317 270 ntBASIC13.77□□□□□ -0.21
Trav18A0A075B656 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Gm37025-201ENSMUST00000195159 829 ntBASIC13.77□□□□□ -0.21
Trav18A0A075B656 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.77□□□□□ -0.21
Trav18A0A075B656 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.77□□□□□ -0.21
Trav18A0A075B656 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav18A0A075B656 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms