Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Trav17A0A075B655 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav17A0A075B655 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Trav17A0A075B655 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav17A0A075B655 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav17A0A075B655 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav17A0A075B655 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav17A0A075B655 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Gm15375-201ENSMUST00000119510 849 ntBASIC13.38□□□□□ -0.27
Trav17A0A075B655 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.38□□□□□ -0.27
Trav17A0A075B655 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav17A0A075B655 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.37□□□□□ -0.27
Trav17A0A075B655 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav17A0A075B655 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Gm5408-201ENSMUST00000197998 747 ntBASIC13.37□□□□□ -0.27
Trav17A0A075B655 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Gm4968-201ENSMUST00000071458 858 ntBASIC13.37□□□□□ -0.27
Trav17A0A075B655 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav17A0A075B655 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms