Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-4A0A075B654 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-4A0A075B654 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Gm38345-201ENSMUST00000192635 1748 ntBASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav3-4A0A075B654 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 AC137127.1-201ENSMUST00000213466 1078 ntBASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Gm44544-201ENSMUST00000207052 1844 ntBASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms