Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Zfp783-201ENSMUST00000095946 670 ntBASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6n-5A0A075B621 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Gm11643-201ENSMUST00000119578 864 ntBASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.07□□□□□ -0.32
Trav6n-5A0A075B621 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Nespas-201ENSMUST00000143738 1083 ntBASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6n-5A0A075B621 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Gm2399-201ENSMUST00000104944 225 ntBASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Gm21956-201ENSMUST00000179946 522 ntBASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Gm43017-201ENSMUST00000198296 752 ntBASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6n-5A0A075B621 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-5A0A075B621 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms