Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm24841-201ENSMUST00000158676 357 ntBASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm17661-201ENSMUST00000170317 270 ntBASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm13158-201ENSMUST00000122007 736 ntBASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6-1A0A075B5Z8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-1A0A075B5Z8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-1A0A075B5Z8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav6-1A0A075B5Z8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav6-1A0A075B5Z8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav6-1A0A075B5Z8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-1A0A075B5Z8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.52□□□□□ -0.24
Trav6-1A0A075B5Z8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav6-1A0A075B5Z8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm11249-201ENSMUST00000117071 859 ntBASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm12933-201ENSMUST00000120203 872 ntBASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav6-1A0A075B5Z8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms