Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC009597.2-201ENST00000604659 592 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AC241377.1-201ENST00000619797 406 ntBASIC5.7□□□□□ -1.5
NXF3Q9H4D5 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NXF3Q9H4D5 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 CASC19-281ENST00000642118 1554 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 SNURFL-201ENST00000309296 343 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AL109941.1-201ENST00000401925 229 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AL354868.1-201ENST00000417077 482 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AL590762.4-201ENST00000425885 253 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 RPS4XP16-201ENST00000427198 791 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC099670.2-201ENST00000435130 321 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AL359265.1-201ENST00000440296 795 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC092647.3-201ENST00000443044 633 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 REG1CP-206ENST00000447469 496 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC009963.4-201ENST00000448535 339 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC093815.1-201ENST00000508637 280 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC004980.4-201ENST00000513375 203 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC012400.1-201ENST00000518452 381 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC136777.2-201ENST00000522979 358 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 OR1F2P-201ENST00000570470 933 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC011447.4-201ENST00000587562 111 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC025857.2-201ENST00000602711 238 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC008814.1-201ENST00000603797 406 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC015660.5-201ENST00000623238 564 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC020763.5-201ENST00000623298 430 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AL355834.1-201ENST00000556602 3965 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NXF3Q9H4D5 AC053481.2-202ENST00000582394 1500 ntBASIC5.69□□□□□ -1.5
NXF3Q9H4D5 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 NUDT19P3-201ENST00000404698 555 ntBASIC5.68□□□□□ -1.5
NXF3Q9H4D5 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 RBMY2QP-201ENST00000429799 1147 ntBASIC5.68□□□□□ -1.5
NXF3Q9H4D5 ABCC13-202ENST00000463099 3842 ntBASIC5.68□□□□□ -1.5
NXF3Q9H4D5 CR383656.1-201ENST00000484916 377 ntBASIC5.68□□□□□ -1.5
NXF3Q9H4D5 AC231760.1-201ENST00000498002 260 ntBASIC5.68□□□□□ -1.5
NXF3Q9H4D5 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 AC111000.6-201ENST00000514471 709 ntBASIC5.68□□□□□ -1.5
NXF3Q9H4D5 RN7SKP147-201ENST00000517154 244 ntBASIC5.68□□□□□ -1.5
NXF3Q9H4D5 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 AL442128.2-201ENST00000620246 1824 ntBASIC5.68□□□□□ -1.5
NXF3Q9H4D5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NXF3Q9H4D5 NR1H5P-201ENST00000452683 1377 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 AC079298.1-201ENST00000625026 1619 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NXF3Q9H4D5 AC131971.1-201ENST00000332881 1482 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 RNA5SP90-201ENST00000364801 99 ntBASIC5.67□□□□□ -1.5
NXF3Q9H4D5 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms