Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC013410.2-201ENST00000422627 201 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 TNPO1P1-201ENST00000423641 1138 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 AL445528.1-201ENST00000426330 420 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 KRT8P51-201ENST00000438938 274 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 ARAFP2-201ENST00000440565 559 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCNKAP51800 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCNKAP51800 RPL12P39-201ENST00000455456 496 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 RN7SL72P-201ENST00000460697 269 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCNKAP51800 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCNKAP51800 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCNKAP51800 SETP12-201ENST00000514068 805 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 RNU6-760P-201ENST00000516078 97 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCNKAP51800 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.55□□□□□ -1.52
CLCNKAP51800 NPM1P42-201ENST00000560329 862 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.55□□□□□ -1.52
CLCNKAP51800 MIR4311-201ENST00000580794 100 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 AC040174.2-201ENST00000602701 465 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 AL035661.1-201ENST00000620459 1144 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCNKAP51800 AL049767.1-202ENST00000637826 242 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCNKAP51800 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLCNKAP51800 AL355488.2-201ENST00000609909 2850 ntBASIC5.55□□□□□ -1.52
CLCNKAP51800 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCNKAP51800 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCNKAP51800 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.55□□□□□ -1.52
CLCNKAP51800 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CLCNKAP51800 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCNKAP51800 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCNKAP51800 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CLCNKAP51800 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLCNKAP51800 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.55□□□□□ -1.52
CLCNKAP51800 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CLCNKAP51800 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.54□□□□□ -1.52
CLCNKAP51800 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCNKAP51800 RN7SKP124-201ENST00000364730 341 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 U3.25-201ENST00000391209 220 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.54□□□□□ -1.52
CLCNKAP51800 OR6E1P-201ENST00000414424 923 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 AC096644.3-201ENST00000416788 338 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCNKAP51800 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.54□□□□□ -1.52
CLCNKAP51800 AL590399.2-201ENST00000427536 309 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 FMO7P-201ENST00000436045 768 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCNKAP51800 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.54□□□□□ -1.52
CLCNKAP51800 AL450023.1-201ENST00000450868 751 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 RPS7P6-201ENST00000485777 579 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 OR9N1P-201ENST00000491296 333 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 RN7SL284P-201ENST00000498823 275 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCNKAP51800 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CLCNKAP51800 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.54□□□□□ -1.52
CLCNKAP51800 OR4A46P-201ENST00000527255 933 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 OR4R2P-201ENST00000530815 597 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 LINC00557-201ENST00000563184 1279 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 AC015720.2-201ENST00000567709 334 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.54□□□□□ -1.52
CLCNKAP51800 MIR3176-201ENST00000582210 90 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.54□□□□□ -1.52
CLCNKAP51800 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCNKAP51800 AP002884.5-201ENST00000595053 1132 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 HIRAP1-201ENST00000605318 787 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.54□□□□□ -1.52
CLCNKAP51800 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.54□□□□□ -1.52
CLCNKAP51800 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.54□□□□□ -1.52
CLCNKAP51800 AC016745.2-201ENST00000608834 3443 ntBASIC5.54□□□□□ -1.52
CLCNKAP51800 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.54□□□□□ -1.52
CLCNKAP51800 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CLCNKAP51800 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLCNKAP51800 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.54□□□□□ -1.52
CLCNKAP51800 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 AC068446.1-201ENST00000556425 1549 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
CLCNKAP51800 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CLCNKAP51800 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 PWAR1-201ENST00000624188 2414 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 AC004158.1-201ENST00000564508 4319 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCNKAP51800 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCNKAP51800 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCNKAP51800 AL513325.1-201ENST00000417716 1034 ntBASIC5.53□□□□□ -1.52
CLCNKAP51800 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms