Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 NXT1P1-201ENST00000458481 316 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC117525.1-201ENST00000515228 503 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 PMS2P3-207ENST00000529061 717 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 TRIM51DP-201ENST00000529746 596 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 OR5AM1P-201ENST00000532136 1032 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC104072.1-201ENST00000568817 668 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 MTATP6P24-201ENST00000576835 677 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC112220.2-201ENST00000605513 533 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AL356608.1-201ENST00000610034 820 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC117490.2-201ENST00000610042 594 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 MIR6133-201ENST00000617057 108 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AP006248.3-201ENST00000623580 594 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC099654.9-201ENST00000637055 678 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 GVINP1-202ENST00000531871 7271 ntBASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZNF549Q6P9A3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 SNORA63.3-201ENST00000362682 132 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 RN7SKP145-201ENST00000363291 303 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 RNU6-584P-201ENST00000410350 95 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 RPS3AP25-201ENST00000411660 793 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC009506.2-201ENST00000420635 840 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC007161.1-204ENST00000423039 460 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC023141.6-201ENST00000429418 337 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC002069.1-201ENST00000429649 1159 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC023271.1-201ENST00000445936 1090 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 RN7SL197P-201ENST00000466981 299 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC096571.1-202ENST00000506634 735 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AL158050.2-201ENST00000605336 568 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC025574.2-201ENST00000615621 514 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC140725.3-201ENST00000616193 880 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC138907.10-201ENST00000623708 983 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AL513548.1-201ENST00000562904 1724 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 AC016745.2-201ENST00000608834 3443 ntBASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF549Q6P9A3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms