Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC100767.2-201ENST00000604840 693 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AL118522.2-201ENST00000616045 615 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AC135068.5-201ENST00000624197 983 ntBASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.6□□□□□ -1.51
CDKL3Q8IVW4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 RNA5SP46-201ENST00000362370 120 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 RN7SKP28-201ENST00000364770 305 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 RNU4-2-201ENST00000365668 141 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 AC002069.1-201ENST00000429649 1159 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 FMO7P-201ENST00000436045 768 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 AC016772.1-201ENST00000444170 1261 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 NDUFA5P5-201ENST00000468361 342 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 AC094085.1-201ENST00000468914 584 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 OR8G3P-201ENST00000533406 921 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 AC008115.3-201ENST00000614874 549 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 AC016542.2-201ENST00000624201 619 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 AC007683.2-201ENST00000624681 714 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 AC003973.3-201ENST00000624863 2822 ntBASIC5.59□□□□□ -1.51
CDKL3Q8IVW4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CDKL3Q8IVW4 AC091305.2-201ENST00000624049 1576 ntBASIC5.59□□□□□ -1.52
CDKL3Q8IVW4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 SNORA48.4-201ENST00000391089 134 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 SNORA11.3-201ENST00000408471 128 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AL596448.1-201ENST00000415024 392 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC017019.1-201ENST00000426129 261 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC138866.2-201ENST00000508650 584 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 SNORA70.11-201ENST00000515987 138 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 SNORA70.13-201ENST00000516116 138 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AP004609.2-201ENST00000532177 190 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC010547.6-201ENST00000571789 193 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC005726.4-201ENST00000582858 458 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 RNU6-84P-201ENST00000607737 102 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AL365181.4-201ENST00000609800 547 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC244107.2-201ENST00000611773 76 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 SNORA11.6-201ENST00000619030 128 ntBASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.58□□□□□ -1.52
CDKL3Q8IVW4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms