Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC009237.13-201ENST00000603193 276 ntBASIC5.19□□□□□ -1.58
LIM2P55344 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.19□□□□□ -1.58
LIM2P55344 AL589674.2-201ENST00000604304 337 ntBASIC5.19□□□□□ -1.58
LIM2P55344 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.19□□□□□ -1.58
LIM2P55344 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.19□□□□□ -1.58
LIM2P55344 AC063952.1-203ENST00000634410 658 ntBASIC5.19□□□□□ -1.58
LIM2P55344 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LIM2P55344 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LIM2P55344 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
LIM2P55344 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIM2P55344 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LIM2P55344 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.19□□□□□ -1.58
LIM2P55344 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LIM2P55344 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LIM2P55344 AC079097.1-201ENST00000512187 1399 ntBASIC5.18□□□□□ -1.58
LIM2P55344 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.18□□□□□ -1.58
LIM2P55344 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LIM2P55344 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
LIM2P55344 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.18□□□□□ -1.58
LIM2P55344 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.18□□□□□ -1.58
LIM2P55344 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 MIR323A-201ENST00000362199 86 ntBASIC5.18□□□□□ -1.58
LIM2P55344 RNA5SP319-201ENST00000362768 119 ntBASIC5.18□□□□□ -1.58
LIM2P55344 RNA5SP234-201ENST00000363916 119 ntBASIC5.18□□□□□ -1.58
LIM2P55344 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LIM2P55344 SNORA5.1-201ENST00000384275 131 ntBASIC5.18□□□□□ -1.58
LIM2P55344 SNORD56.6-201ENST00000384569 71 ntBASIC5.18□□□□□ -1.58
LIM2P55344 RNU6-316P-201ENST00000391027 107 ntBASIC5.18□□□□□ -1.58
LIM2P55344 AL513325.1-201ENST00000417716 1034 ntBASIC5.18□□□□□ -1.58
LIM2P55344 MRPS21P2-201ENST00000424704 264 ntBASIC5.18□□□□□ -1.58
LIM2P55344 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.18□□□□□ -1.58
LIM2P55344 CYCSP51-201ENST00000443545 318 ntBASIC5.18□□□□□ -1.58
LIM2P55344 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.18□□□□□ -1.58
LIM2P55344 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.18□□□□□ -1.58
LIM2P55344 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.18□□□□□ -1.58
LIM2P55344 RANP1-206ENST00000455094 651 ntBASIC5.18□□□□□ -1.58
LIM2P55344 RPL35AP19-201ENST00000469425 329 ntBASIC5.18□□□□□ -1.58
LIM2P55344 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.18□□□□□ -1.58
LIM2P55344 AC090638.1-201ENST00000498296 909 ntBASIC5.18□□□□□ -1.58
LIM2P55344 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.18□□□□□ -1.58
LIM2P55344 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.18□□□□□ -1.58
LIM2P55344 AC079064.1-201ENST00000528365 362 ntBASIC5.18□□□□□ -1.58
LIM2P55344 OR4A43P-201ENST00000532938 908 ntBASIC5.18□□□□□ -1.58
LIM2P55344 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.18□□□□□ -1.58
LIM2P55344 AC078878.1-201ENST00000539832 958 ntBASIC5.18□□□□□ -1.58
LIM2P55344 AC012146.2-201ENST00000576545 416 ntBASIC5.18□□□□□ -1.58
LIM2P55344 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.18□□□□□ -1.58
LIM2P55344 AC115989.2-201ENST00000578640 563 ntBASIC5.18□□□□□ -1.58
LIM2P55344 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.18□□□□□ -1.58
LIM2P55344 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.18□□□□□ -1.58
LIM2P55344 AC010245.2-201ENST00000606908 1167 ntBASIC5.18□□□□□ -1.58
LIM2P55344 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.18□□□□□ -1.58
LIM2P55344 AC022960.2-201ENST00000616300 666 ntBASIC5.18□□□□□ -1.58
LIM2P55344 AP003400.2-201ENST00000624036 666 ntBASIC5.18□□□□□ -1.58
LIM2P55344 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LIM2P55344 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LIM2P55344 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.18□□□□□ -1.58
LIM2P55344 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
LIM2P55344 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 AP000641.1-201ENST00000531988 1639 ntBASIC5.18□□□□□ -1.58
LIM2P55344 AL359715.3-201ENST00000569267 2123 ntBASIC5.18□□□□□ -1.58
LIM2P55344 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.18□□□□□ -1.58
LIM2P55344 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LIM2P55344 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.18□□□□□ -1.58
LIM2P55344 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.18□□□□□ -1.58
LIM2P55344 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.18□□□□□ -1.58
LIM2P55344 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LIM2P55344 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.18□□□□□ -1.58
LIM2P55344 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LIM2P55344 AC093671.1-201ENST00000624981 2929 ntBASIC5.17□□□□□ -1.58
LIM2P55344 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 ABCC13-202ENST00000463099 3842 ntBASIC5.17□□□□□ -1.58
LIM2P55344 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.17□□□□□ -1.58
LIM2P55344 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LIM2P55344 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 RNA5SP435-201ENST00000364044 108 ntBASIC5.17□□□□□ -1.58
LIM2P55344 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.17□□□□□ -1.58
LIM2P55344 AL512422.1-201ENST00000407033 553 ntBASIC5.17□□□□□ -1.58
LIM2P55344 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.17□□□□□ -1.58
LIM2P55344 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.17□□□□□ -1.58
LIM2P55344 RN7SL51P-201ENST00000468230 285 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms