Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.07■□□□□ 0.32
Crlf3Q9Z2L7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Crlf3Q9Z2L7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Gm26524-201ENSMUST00000192339 390 ntBASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Crlf3Q9Z2L7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.04■□□□□ 0.32
Crlf3Q9Z2L7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Gm20049-201ENSMUST00000219950 730 ntBASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Crlf3Q9Z2L7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms