Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Haglr-201ENSMUST00000100000 2085 ntBASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn9Q9Z0S7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Gm18958-201ENSMUST00000174258 762 ntBASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Mir5122-201ENSMUST00000175004 89 ntBASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Gm21814-202ENSMUST00000203277 873 ntBASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cldn9Q9Z0S7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cldn9Q9Z0S7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn9Q9Z0S7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn9Q9Z0S7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cldn9Q9Z0S7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms