Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.48■□□□□ 0.39
Smarcb1Q9Z0H3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Gm15794-201ENSMUST00000120182 631 ntBASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcb1Q9Z0H3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Gm28033-201ENSMUST00000184224 96 ntBASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcb1Q9Z0H3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smarcb1Q9Z0H3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smarcb1Q9Z0H3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smarcb1Q9Z0H3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcb1Q9Z0H3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Smarcb1Q9Z0H3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.43■□□□□ 0.38
Smarcb1Q9Z0H3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Smarcb1Q9Z0H3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.43■□□□□ 0.38
Smarcb1Q9Z0H3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Smarcb1Q9Z0H3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarcb1Q9Z0H3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcb1Q9Z0H3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcb1Q9Z0H3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcb1Q9Z0H3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Olfr129-201ENSMUST00000122318 993 ntBASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Gm27741-201ENSMUST00000185060 237 ntBASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Gm17971-201ENSMUST00000190239 806 ntBASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms