Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Gm15565-201ENSMUST00000118890 427 ntBASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cldn3Q9Z0G9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Gm43799-201ENSMUST00000201845 579 ntBASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cldn3Q9Z0G9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Gm27000-201ENSMUST00000182943 842 ntBASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cldn3Q9Z0G9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Gm13474-201ENSMUST00000122466 815 ntBASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldn3Q9Z0G9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldn3Q9Z0G9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms