Protein–RNA interactions for Protein: Q9Z0E0

Ncdn, Neurochondrin, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcdnQ9Z0E0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Gm14822-201ENSMUST00000122247 291 ntBASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Mir5126-201ENSMUST00000175513 77 ntBASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Auts2-212ENSMUST00000178555 309 ntBASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NcdnQ9Z0E0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
NcdnQ9Z0E0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
NcdnQ9Z0E0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NcdnQ9Z0E0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.76■□□□□ 0.27
NcdnQ9Z0E0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Psmb5-202ENSMUST00000227257 622 ntBASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NcdnQ9Z0E0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm14057-201ENSMUST00000120631 482 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44357-201ENSMUST00000195897 142 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm19658-201ENSMUST00000196231 138 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44367-201ENSMUST00000196836 138 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44350-201ENSMUST00000197197 138 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44390-201ENSMUST00000197533 144 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44313-201ENSMUST00000198018 138 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44486-201ENSMUST00000198508 138 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44454-201ENSMUST00000198541 138 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44314-201ENSMUST00000199263 138 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44394-201ENSMUST00000199558 138 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44484-201ENSMUST00000199873 138 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44466-201ENSMUST00000200264 138 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm44359-201ENSMUST00000200671 138 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NcdnQ9Z0E0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms