Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ggps1Q9WTN0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ggps1Q9WTN0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Gm18421-201ENSMUST00000204122 625 ntBASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ggps1Q9WTN0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Gm29707-201ENSMUST00000196325 491 ntBASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Birc2-201ENSMUST00000054878 378 ntBASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.65■□□□□ 0.58
Ggps1Q9WTN0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ggps1Q9WTN0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Gm12895-201ENSMUST00000122214 226 ntBASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ggps1Q9WTN0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Gm8969-201ENSMUST00000199694 526 ntBASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ggps1Q9WTN0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ggps1Q9WTN0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms