Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Mir2861-201ENSMUST00000175539 82 ntBASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Gm29257-201ENSMUST00000186115 639 ntBASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Gm20049-201ENSMUST00000219950 730 ntBASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfwd2Q9R1A8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Gm27275-201ENSMUST00000184318 272 ntBASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfwd2Q9R1A8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfwd2Q9R1A8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Gm13401-201ENSMUST00000117074 291 ntBASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfwd2Q9R1A8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Gm12527-201ENSMUST00000117967 564 ntBASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfwd2Q9R1A8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Gm10418-201ENSMUST00000100943 576 ntBASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfwd2Q9R1A8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms