Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shroom3Q9QXN0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Gm10566-201ENSMUST00000086739 996 ntBASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shroom3Q9QXN0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Phf7-203ENSMUST00000226565 1971 ntBASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Shroom3Q9QXN0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Gm28033-201ENSMUST00000184224 96 ntBASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.84■□□□□ 0.29
Shroom3Q9QXN0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Shroom3Q9QXN0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shroom3Q9QXN0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.83■□□□□ 0.29
Shroom3Q9QXN0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shroom3Q9QXN0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shroom3Q9QXN0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shroom3Q9QXN0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Shroom3Q9QXN0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shroom3Q9QXN0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shroom3Q9QXN0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom3Q9QXN0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom3Q9QXN0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom3Q9QXN0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Shroom3Q9QXN0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Shroom3Q9QXN0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom3Q9QXN0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom3Q9QXN0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shroom3Q9QXN0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Mir1668-201ENSMUST00000184114 107 ntBASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Gm27704-201ENSMUST00000185094 107 ntBASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shroom3Q9QXN0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms