Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Gm37856-201ENSMUST00000191634 999 ntBASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chaf1aQ9QWF0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.87■□□□□ 0.61
Chaf1aQ9QWF0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Gm12382-201ENSMUST00000122005 922 ntBASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chaf1aQ9QWF0 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Haglr-201ENSMUST00000100000 2085 ntBASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Trmt13-210ENSMUST00000198454 880 ntBASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1aQ9QWF0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1aQ9QWF0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms