Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Gm25990-201ENSMUST00000102440 86 ntBASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1fQ9JIS7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1fQ9JIS7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Gm4459-201ENSMUST00000118750 468 ntBASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cacna1fQ9JIS7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1fQ9JIS7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1fQ9JIS7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.08■□□□□ 0.65
Cacna1fQ9JIS7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Cacna1fQ9JIS7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1fQ9JIS7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1fQ9JIS7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.08■□□□□ 0.65
Cacna1fQ9JIS7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Cacna1fQ9JIS7 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 Gm25406-201ENSMUST00000157599 105 ntBASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1fQ9JIS7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Gm4995-201ENSMUST00000117247 432 ntBASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.07■□□□□ 0.64
Cacna1fQ9JIS7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms