Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup50Q9JIH2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.81■□□□□ 0.44
Nup50Q9JIH2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nup50Q9JIH2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup50Q9JIH2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Gm13168-201ENSMUST00000121771 632 ntBASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup50Q9JIH2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Gm7791-201ENSMUST00000219066 539 ntBASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Timm23-208ENSMUST00000226683 750 ntBASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nup50Q9JIH2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup50Q9JIH2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Odf3b-204ENSMUST00000227834 930 ntBASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup50Q9JIH2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup50Q9JIH2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Nup50Q9JIH2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup50Q9JIH2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup50Q9JIH2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup50Q9JIH2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup50Q9JIH2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nup50Q9JIH2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms