Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ube3bQ9ES34 Gm45328-201ENSMUST00000210942 917 ntBASIC20.05■□□□□ 0.8
Ube3bQ9ES34 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ube3bQ9ES34 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.05■□□□□ 0.8
Ube3bQ9ES34 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ube3bQ9ES34 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube3bQ9ES34 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.05■□□□□ 0.8
Ube3bQ9ES34 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.04■□□□□ 0.8
Ube3bQ9ES34 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ube3bQ9ES34 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube3bQ9ES34 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ube3bQ9ES34 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ube3bQ9ES34 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Ank2-226ENSMUST00000189368 339 ntBASIC20.01■□□□□ 0.79
Ube3bQ9ES34 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Gm10819-201ENSMUST00000099988 561 ntBASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube3bQ9ES34 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ube3bQ9ES34 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ube3bQ9ES34 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ube3bQ9ES34 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ube3bQ9ES34 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ube3bQ9ES34 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20■□□□□ 0.79
Ube3bQ9ES34 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ube3bQ9ES34 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ube3bQ9ES34 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20■□□□□ 0.79
Ube3bQ9ES34 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ube3bQ9ES34 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ube3bQ9ES34 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ube3bQ9ES34 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ube3bQ9ES34 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ube3bQ9ES34 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ube3bQ9ES34 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube3bQ9ES34 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube3bQ9ES34 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
Ube3bQ9ES34 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.98■□□□□ 0.79
Ube3bQ9ES34 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube3bQ9ES34 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ube3bQ9ES34 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ube3bQ9ES34 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms