Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4bQ9ES00 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4bQ9ES00 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4bQ9ES00 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4bQ9ES00 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4bQ9ES00 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4bQ9ES00 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube4bQ9ES00 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.26■□□□□ 0.19
Ube4bQ9ES00 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.26■□□□□ 0.19
Ube4bQ9ES00 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube4bQ9ES00 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4bQ9ES00 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4bQ9ES00 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4bQ9ES00 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4bQ9ES00 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4bQ9ES00 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ube4bQ9ES00 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4bQ9ES00 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4bQ9ES00 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4bQ9ES00 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4bQ9ES00 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ube4bQ9ES00 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ube4bQ9ES00 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.24■□□□□ 0.19
Ube4bQ9ES00 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ube4bQ9ES00 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms