Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps35Q9EQH3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Vps35Q9EQH3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Gm2274-201ENSMUST00000184539 609 ntBASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Mir7071-201ENSMUST00000184847 69 ntBASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Gm7889-201ENSMUST00000185591 958 ntBASIC16.86■□□□□ 0.29
Vps35Q9EQH3 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Vps35Q9EQH3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps35Q9EQH3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps35Q9EQH3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms