Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Gm22240-201ENSMUST00000175225 82 ntBASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Il3ra-202ENSMUST00000223589 738 ntBASIC17.59■□□□□ 0.41
Cpne8Q9DC53 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne8Q9DC53 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne8Q9DC53 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne8Q9DC53 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne8Q9DC53 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne8Q9DC53 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne8Q9DC53 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne8Q9DC53 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cpne8Q9DC53 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne8Q9DC53 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Cpne8Q9DC53 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Mir5122-201ENSMUST00000175004 89 ntBASIC17.58■□□□□ 0.4
Cpne8Q9DC53 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Timm23-208ENSMUST00000226683 750 ntBASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Cpne8Q9DC53 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne8Q9DC53 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cpne8Q9DC53 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne8Q9DC53 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms