Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Gm6659-201ENSMUST00000174752 547 ntBASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ssmem1Q9D9Y8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ssmem1Q9D9Y8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Gm26039-201ENSMUST00000158152 144 ntBASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssmem1Q9D9Y8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ssmem1Q9D9Y8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms