Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Stag1Q9D3E6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Stag1Q9D3E6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Stag1Q9D3E6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Stag1Q9D3E6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Stag1Q9D3E6 Gm24589-201ENSMUST00000116692 94 ntBASIC20.06■□□□□ 0.8
Stag1Q9D3E6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Stag1Q9D3E6 Gm44450-201ENSMUST00000199528 114 ntBASIC20.06■□□□□ 0.8
Stag1Q9D3E6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Stag1Q9D3E6 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.06■□□□□ 0.8
Stag1Q9D3E6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Stag1Q9D3E6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Stag1Q9D3E6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Gm34391-201ENSMUST00000203706 907 ntBASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Stag1Q9D3E6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Stag1Q9D3E6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Stag1Q9D3E6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Stag1Q9D3E6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Stag1Q9D3E6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stag1Q9D3E6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.02■□□□□ 0.8
Stag1Q9D3E6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.02■□□□□ 0.8
Stag1Q9D3E6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.02■□□□□ 0.8
Stag1Q9D3E6 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.02■□□□□ 0.8
Stag1Q9D3E6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stag1Q9D3E6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stag1Q9D3E6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.02■□□□□ 0.8
Stag1Q9D3E6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Stag1Q9D3E6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Stag1Q9D3E6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Stag1Q9D3E6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Stag1Q9D3E6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Stag1Q9D3E6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Stag1Q9D3E6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Stag1Q9D3E6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Stag1Q9D3E6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Gm29707-201ENSMUST00000196325 491 ntBASIC20.01■□□□□ 0.79
Stag1Q9D3E6 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Birc2-201ENSMUST00000054878 378 ntBASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Stag1Q9D3E6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Stag1Q9D3E6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Stag1Q9D3E6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Stag1Q9D3E6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms