Protein–RNA interactions for Protein: Q9D2L9

Fam111a, Protein FAM111A, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam111aQ9D2L9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam111aQ9D2L9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Fam111aQ9D2L9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fam111aQ9D2L9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fam111aQ9D2L9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Fam111aQ9D2L9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.17■□□□□ 0.5
Fam111aQ9D2L9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Gm43799-201ENSMUST00000201845 579 ntBASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fam111aQ9D2L9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Fam111aQ9D2L9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Fam111aQ9D2L9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Fam111aQ9D2L9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam111aQ9D2L9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Gm7889-201ENSMUST00000185591 958 ntBASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fam111aQ9D2L9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms