Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 Mtag2-201ENSMUST00000058665 714 ntBASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chaf1bQ9D0N7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Gm5874-201ENSMUST00000096101 508 ntBASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chaf1bQ9D0N7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chaf1bQ9D0N7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chaf1bQ9D0N7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Chaf1bQ9D0N7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chaf1bQ9D0N7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chaf1bQ9D0N7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chaf1bQ9D0N7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chaf1bQ9D0N7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chaf1bQ9D0N7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chaf1bQ9D0N7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Chaf1bQ9D0N7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chaf1bQ9D0N7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chaf1bQ9D0N7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms