Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Golph3-202ENSMUST00000226517 2359 ntBASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd1Q9D0E3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 Gm8655-201ENSMUST00000221159 852 ntBASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd1Q9D0E3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Gm27622-201ENSMUST00000183779 60 ntBASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Gm18187-201ENSMUST00000196476 984 ntBASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd1Q9D0E3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
Lysmd1Q9D0E3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Lysmd1Q9D0E3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd1Q9D0E3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd1Q9D0E3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd1Q9D0E3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Gm22175-201ENSMUST00000175007 78 ntBASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Lysmd1Q9D0E3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Gm13365-201ENSMUST00000121188 973 ntBASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Gm43433-201ENSMUST00000196573 481 ntBASIC18■□□□□ 0.47
Lysmd1Q9D0E3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd1Q9D0E3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd1Q9D0E3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Lysmd1Q9D0E3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd1Q9D0E3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd1Q9D0E3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lysmd1Q9D0E3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms