Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ssbp3Q9D032 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Gm23634-201ENSMUST00000175071 91 ntBASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Mir1668-201ENSMUST00000184114 107 ntBASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ssbp3Q9D032 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.03□□□□□ -0.16
Ssbp3Q9D032 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp3Q9D032 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp3Q9D032 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Ssbp3Q9D032 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ssbp3Q9D032 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ssbp3Q9D032 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 AA414768-201ENSMUST00000121924 1257 ntBASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ssbp3Q9D032 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.01□□□□□ -0.17
Ssbp3Q9D032 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms