Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssu72Q9CY97 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssu72Q9CY97 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssu72Q9CY97 Mir5133-201ENSMUST00000174955 77 ntBASIC16.77■□□□□ 0.28
Ssu72Q9CY97 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ssu72Q9CY97 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ssu72Q9CY97 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ssu72Q9CY97 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.77■□□□□ 0.27
Ssu72Q9CY97 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ssu72Q9CY97 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Ssu72Q9CY97 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Gm26571-201ENSMUST00000181399 666 ntBASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Gm18025-201ENSMUST00000221733 862 ntBASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ssu72Q9CY97 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ssu72Q9CY97 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ssu72Q9CY97 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssu72Q9CY97 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssu72Q9CY97 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssu72Q9CY97 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssu72Q9CY97 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssu72Q9CY97 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ssu72Q9CY97 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssu72Q9CY97 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ssu72Q9CY97 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssu72Q9CY97 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ssu72Q9CY97 Gm37025-201ENSMUST00000195159 829 ntBASIC16.72■□□□□ 0.27
Ssu72Q9CY97 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssu72Q9CY97 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms